Index

A

anova_test() (in module omicspreprocessing.core), [1]

C

calculate_median_z_scores() (in module omicspreprocessing.core), [1] check_path_exist() (in module omicspreprocessing.core), [1]

compare_two_distributions() (in module omicspreprocessing.core), [1] custom_imputation() (in module omicspreprocessing.core), [1]

D

do_normalize_with_target_df() (in module omicspreprocessing.core), [1]

do_shapiro_test() (in module omicspreprocessing.core), [1] do_smirnov_test() (in module omicspreprocessing.core), [1]

G

get_cv_from_melted_df() (in module omicspreprocessing.core), [1] get_replicate_number() (in module omicspreprocessing.core), [1]

get_result() (omicspreprocessing.parallel_computing.ParallelComputing method), [1] get_t_across_all_proteins() (in module omicspreprocessing.core), [1]

I

impute_normal_down_shift_distribution() (in module omicspreprocessing.core), [1]

intersection() (in module omicspreprocessing.core), [1]

L

log2_transform_intensities() (in module omicspreprocessing.core), [1] log2fold_change_calculator() (in module omicspreprocessing.core), [1]

log2fold_change_calculator_LOO() (in module omicspreprocessing.core), [1] log_transform_intensities() (in module omicspreprocessing.core), [1]

M

make_cv_plot() (in module omicspreprocessing.core), [1] make_pair_combinations() (in module omicspreprocessing.core), [1] median_centering() (in module omicspreprocessing.core), [1] median_centering_ms1() (in module omicspreprocessing.core), [1]

module omicspreprocessing, [1] omicspreprocessing.core, [1] omicspreprocessing.parallel_computing, [1]

O

omicspreprocessing module, [1] omicspreprocessing.core module, [1]

omicspreprocessing.parallel_computing module, [1] one_vs_all_t_test() (in module omicspreprocessing.core), [1]

P

ParallelComputing (class in omicspreprocessing.parallel_computing), [1] plot_cv_per_condition() (in module omicspreprocessing.core), [1]

post_hoc_ANOVA() (in module omicspreprocessing.core), [1] protein_remover_by_sparcity() (in module omicspreprocessing.core), [1]

R

raw_median_centering_normalization() (in module omicspreprocessing.core), [1]

ROC_curve_analysis() (in module omicspreprocessing.core), [1] run_in_parallel() (omicspreprocessing.parallel_computing.ParallelComputing method), [1]

S

seaborn_volcano() (in module omicspreprocessing.core), [1] set_func() (omicspreprocessing.parallel_computing.ParallelComputing method), [1] set_list() (omicspreprocessing.parallel_computing.ParallelComputing method), [1]

set_num_cores() (omicspreprocessing.parallel_computing.ParallelComputing method), [1] show_spent_time() (in module omicspreprocessing.core), [1] split_df_to_list_by_group() (omicspreprocessing.parallel_computing.ParallelComputing static method), [1]

T

t_test() (in module omicspreprocessing.core), [1]

U

univariate_ROC_analysis_by_CV_permutation() (in module omicspreprocessing.core), [1]

unnest_proteingroups() (in module omicspreprocessing.core), [1]

V

volcanoplot() (in module omicspreprocessing.core), [1]